# Only cancer types with minimum 2000 mutations for SBS signatures and minimum 1000 mutations for DBS and ID signatures with average probability at least 0.75 are considered. # For real mutations on transcribed:T, untranscribed:U, bitranscribed:B and nontranscribed:N strands averaged across cancer types. MutationType Across_All_Cancer_Types T:A[C>A]A 729.5 U:A[C>A]A 428.5 B:A[C>A]A 2.0 N:A[C>A]A 2539.0 T:A[C>A]C 134.0 U:A[C>A]C 100.5 B:A[C>A]C 0.0 N:A[C>A]C 529.5 T:A[C>A]G 17.0 U:A[C>A]G 10.5 B:A[C>A]G 0.0 N:A[C>A]G 73.5 T:A[C>A]T 180.5 U:A[C>A]T 151.5 B:A[C>A]T 0.0 N:A[C>A]T 852.0 T:A[C>G]A 203.0 U:A[C>G]A 135.0 B:A[C>G]A 0.5 N:A[C>G]A 738.0 T:A[C>G]C 24.0 U:A[C>G]C 19.0 B:A[C>G]C 0.0 N:A[C>G]C 123.5 T:A[C>G]G 0.0 U:A[C>G]G 0.0 B:A[C>G]G 0.0 N:A[C>G]G 0.0 T:A[C>G]T 217.5 U:A[C>G]T 216.5 B:A[C>G]T 0.0 N:A[C>G]T 959.5 T:A[C>T]A 156.0 U:A[C>T]A 133.5 B:A[C>T]A 0.0 N:A[C>T]A 625.0 T:A[C>T]C 516.5 U:A[C>T]C 709.5 B:A[C>T]C 0.0 N:A[C>T]C 2603.0 T:A[C>T]G 190.5 U:A[C>T]G 185.5 B:A[C>T]G 0.0 N:A[C>T]G 699.5 T:A[C>T]T 587.0 U:A[C>T]T 629.5 B:A[C>T]T 1.5 N:A[C>T]T 2682.5 T:A[T>A]A 1708.5 U:A[T>A]A 1403.0 B:A[T>A]A 4.0 N:A[T>A]A 7246.5 T:A[T>A]C 344.5 U:A[T>A]C 298.0 B:A[T>A]C 0.5 N:A[T>A]C 1485.5 T:A[T>A]G 7.5 U:A[T>A]G 6.5 B:A[T>A]G 0.0 N:A[T>A]G 65.0 T:A[T>A]T 4772.5 U:A[T>A]T 5535.5 B:A[T>A]T 37.0 N:A[T>A]T 24279.0 T:A[T>C]A 21.5 U:A[T>C]A 16.5 B:A[T>C]A 0.0 N:A[T>C]A 116.5 T:A[T>C]C 30.5 U:A[T>C]C 20.5 B:A[T>C]C 0.0 N:A[T>C]C 153.5 T:A[T>C]G 68.5 U:A[T>C]G 62.5 B:A[T>C]G 0.0 N:A[T>C]G 312.5 T:A[T>C]T 169.0 U:A[T>C]T 182.5 B:A[T>C]T 0.0 N:A[T>C]T 826.5 T:A[T>G]A 1191.5 U:A[T>G]A 1098.0 B:A[T>G]A 1.5 N:A[T>G]A 5542.5 T:A[T>G]C 79.0 U:A[T>G]C 100.0 B:A[T>G]C 0.0 N:A[T>G]C 472.0 T:A[T>G]G 30.0 U:A[T>G]G 52.5 B:A[T>G]G 0.0 N:A[T>G]G 255.0 T:A[T>G]T 0.0 U:A[T>G]T 0.0 B:A[T>G]T 0.0 N:A[T>G]T 0.0 T:C[C>A]A 4.0 U:C[C>A]A 3.5 B:C[C>A]A 0.0 N:C[C>A]A 49.5 T:C[C>A]C 310.5 U:C[C>A]C 350.5 B:C[C>A]C 0.0 N:C[C>A]C 1385.5 T:C[C>A]G 210.0 U:C[C>A]G 285.5 B:C[C>A]G 0.0 N:C[C>A]G 949.5 T:C[C>A]T 1748.5 U:C[C>A]T 2166.0 B:C[C>A]T 8.5 N:C[C>A]T 8564.0 T:C[C>G]A 16.0 U:C[C>G]A 12.5 B:C[C>G]A 0.0 N:C[C>G]A 81.0 T:C[C>G]C 146.0 U:C[C>G]C 175.5 B:C[C>G]C 0.0 N:C[C>G]C 635.0 T:C[C>G]G 8.5 U:C[C>G]G 17.5 B:C[C>G]G 0.0 N:C[C>G]G 61.0 T:C[C>G]T 371.0 U:C[C>G]T 479.5 B:C[C>G]T 1.5 N:C[C>G]T 1728.0 T:C[C>T]A 176.5 U:C[C>T]A 241.5 B:C[C>T]A 0.0 N:C[C>T]A 1028.0 T:C[C>T]C 420.5 U:C[C>T]C 655.5 B:C[C>T]C 0.5 N:C[C>T]C 2177.5 T:C[C>T]G 647.0 U:C[C>T]G 1044.5 B:C[C>T]G 4.0 N:C[C>T]G 2700.5 T:C[C>T]T 1592.0 U:C[C>T]T 2194.0 B:C[C>T]T 11.0 N:C[C>T]T 7805.0 T:C[T>A]A 456.5 U:C[T>A]A 397.0 B:C[T>A]A 1.0 N:C[T>A]A 1687.5 T:C[T>A]C 1187.0 U:C[T>A]C 1460.5 B:C[T>A]C 9.0 N:C[T>A]C 5362.5 T:C[T>A]G 115.0 U:C[T>A]G 115.0 B:C[T>A]G 0.0 N:C[T>A]G 497.0 T:C[T>A]T 3508.5 U:C[T>A]T 4740.0 B:C[T>A]T 32.5 N:C[T>A]T 19646.5 T:C[T>C]A 758.5 U:C[T>C]A 816.0 B:C[T>C]A 3.5 N:C[T>C]A 3058.5 T:C[T>C]C 425.0 U:C[T>C]C 482.5 B:C[T>C]C 1.5 N:C[T>C]C 1637.0 T:C[T>C]G 239.5 U:C[T>C]G 281.0 B:C[T>C]G 0.0 N:C[T>C]G 900.0 T:C[T>C]T 3749.0 U:C[T>C]T 4787.0 B:C[T>C]T 34.0 N:C[T>C]T 18774.5 T:C[T>G]A 309.0 U:C[T>G]A 304.0 B:C[T>G]A 0.0 N:C[T>G]A 1308.5 T:C[T>G]C 495.5 U:C[T>G]C 602.0 B:C[T>G]C 2.5 N:C[T>G]C 2210.0 T:C[T>G]G 193.0 U:C[T>G]G 311.0 B:C[T>G]G 0.0 N:C[T>G]G 1076.5 T:C[T>G]T 1403.5 U:C[T>G]T 1893.5 B:C[T>G]T 10.0 N:C[T>G]T 7244.5 T:G[C>A]A 115.5 U:G[C>A]A 75.0 B:G[C>A]A 0.0 N:G[C>A]A 469.0 T:G[C>A]C 45.0 U:G[C>A]C 43.0 B:G[C>A]C 0.0 N:G[C>A]C 209.0 T:G[C>A]G 0.0 U:G[C>A]G 0.0 B:G[C>A]G 0.0 N:G[C>A]G 0.0 T:G[C>A]T 44.0 U:G[C>A]T 52.5 B:G[C>A]T 0.0 N:G[C>A]T 258.0 T:G[C>G]A 15.5 U:G[C>G]A 12.0 B:G[C>G]A 0.0 N:G[C>G]A 82.5 T:G[C>G]C 41.0 U:G[C>G]C 49.0 B:G[C>G]C 0.0 N:G[C>G]C 189.5 T:G[C>G]G 2.5 U:G[C>G]G 4.5 B:G[C>G]G 0.0 N:G[C>G]G 24.0 T:G[C>G]T 117.5 U:G[C>G]T 160.5 B:G[C>G]T 0.0 N:G[C>G]T 641.5 T:G[C>T]A 8.0 U:G[C>T]A 9.5 B:G[C>T]A 0.0 N:G[C>T]A 52.0 T:G[C>T]C 0.0 U:G[C>T]C 0.0 B:G[C>T]C 0.0 N:G[C>T]C 0.0 T:G[C>T]G 3.0 U:G[C>T]G 5.5 B:G[C>T]G 0.0 N:G[C>T]G 25.0 T:G[C>T]T 26.0 U:G[C>T]T 36.5 B:G[C>T]T 0.0 N:G[C>T]T 226.5 T:G[T>A]A 193.0 U:G[T>A]A 184.5 B:G[T>A]A 0.0 N:G[T>A]A 831.0 T:G[T>A]C 174.5 U:G[T>A]C 217.5 B:G[T>A]C 0.0 N:G[T>A]C 847.5 T:G[T>A]G 0.0 U:G[T>A]G 0.0 B:G[T>A]G 0.0 N:G[T>A]G 0.0 T:G[T>A]T 1472.5 U:G[T>A]T 2045.0 B:G[T>A]T 7.0 N:G[T>A]T 8215.5 T:G[T>C]A 0.0 U:G[T>C]A 0.0 B:G[T>C]A 0.0 N:G[T>C]A 0.0 T:G[T>C]C 35.0 U:G[T>C]C 35.5 B:G[T>C]C 0.0 N:G[T>C]C 167.5 T:G[T>C]G 13.0 U:G[T>C]G 14.0 B:G[T>C]G 0.0 N:G[T>C]G 70.5 T:G[T>C]T 392.5 U:G[T>C]T 695.5 B:G[T>C]T 1.0 N:G[T>C]T 2237.0 T:G[T>G]A 215.0 U:G[T>G]A 301.0 B:G[T>G]A 1.0 N:G[T>G]A 1013.5 T:G[T>G]C 142.5 U:G[T>G]C 202.5 B:G[T>G]C 0.5 N:G[T>G]C 747.5 T:G[T>G]G 621.0 U:G[T>G]G 1144.0 B:G[T>G]G 2.5 N:G[T>G]G 3081.5 T:G[T>G]T 741.5 U:G[T>G]T 1123.5 B:G[T>G]T 2.5 N:G[T>G]T 4210.0 T:T[C>A]A 294.5 U:T[C>A]A 252.0 B:T[C>A]A 0.0 N:T[C>A]A 1105.5 T:T[C>A]C 1459.5 U:T[C>A]C 1531.5 B:T[C>A]C 8.0 N:T[C>A]C 5443.0 T:T[C>A]G 0.0 U:T[C>A]G 0.0 B:T[C>A]G 0.0 N:T[C>A]G 0.0 T:T[C>A]T 535.5 U:T[C>A]T 659.0 B:T[C>A]T 0.5 N:T[C>A]T 2653.5 T:T[C>G]A 223.0 U:T[C>G]A 220.0 B:T[C>G]A 0.5 N:T[C>G]A 910.0 T:T[C>G]C 517.0 U:T[C>G]C 568.5 B:T[C>G]C 2.0 N:T[C>G]C 2107.0 T:T[C>G]G 0.0 U:T[C>G]G 0.0 B:T[C>G]G 0.0 N:T[C>G]G 0.0 T:T[C>G]T 1371.0 U:T[C>G]T 1829.5 B:T[C>G]T 7.5 N:T[C>G]T 6795.0 T:T[C>T]A 1153.0 U:T[C>T]A 1421.5 B:T[C>T]A 1.5 N:T[C>T]A 6854.0 T:T[C>T]C 950.0 U:T[C>T]C 1356.0 B:T[C>T]C 2.5 N:T[C>T]C 5645.5 T:T[C>T]G 0.0 U:T[C>T]G 0.0 B:T[C>T]G 0.0 N:T[C>T]G 3.0 T:T[C>T]T 141.0 U:T[C>T]T 206.0 B:T[C>T]T 0.0 N:T[C>T]T 970.5 T:T[T>A]A 1844.5 U:T[T>A]A 2128.0 B:T[T>A]A 12.5 N:T[T>A]A 7831.0 T:T[T>A]C 2300.5 U:T[T>A]C 2999.5 B:T[T>A]C 14.0 N:T[T>A]C 11772.0 T:T[T>A]G 862.5 U:T[T>A]G 1291.5 B:T[T>A]G 6.0 N:T[T>A]G 4452.0 T:T[T>A]T 17776.5 U:T[T>A]T 28049.0 B:T[T>A]T 205.5 N:T[T>A]T 111915.0 T:T[T>C]A 2276.5 U:T[T>C]A 2995.0 B:T[T>C]A 13.5 N:T[T>C]A 10952.0 T:T[T>C]C 1731.5 U:T[T>C]C 2286.5 B:T[T>C]C 12.5 N:T[T>C]C 8524.5 T:T[T>C]G 965.0 U:T[T>C]G 1401.0 B:T[T>C]G 4.5 N:T[T>C]G 4774.0 T:T[T>C]T 5895.0 U:T[T>C]T 8724.5 B:T[T>C]T 71.0 N:T[T>C]T 31514.5 T:T[T>G]A 1819.5 U:T[T>G]A 2419.5 B:T[T>G]A 12.5 N:T[T>G]A 9375.0 T:T[T>G]C 1245.0 U:T[T>G]C 1759.5 B:T[T>G]C 8.5 N:T[T>G]C 6858.0 T:T[T>G]G 914.5 U:T[T>G]G 1406.0 B:T[T>G]G 5.5 N:T[T>G]G 4899.0 T:T[T>G]T 3708.5 U:T[T>G]T 6014.5 B:T[T>G]T 40.5 N:T[T>G]T 21439.0 # There must be at least 1000 mutations on the strands. # Signature and mutation type must have at least 5% of all signature mutations on the strands. # Odds ratio between fold change of real mutations and fold change of simulated mutations must be at least 1.1. cancer_type signature mutation_type Transcribed_real_count UnTranscribed_real_count NonTranscribed_real_count Transcribed_mean_sims_count UnTranscribed_mean_sims_count NonTranscribed_mean_sims_count transcribed_versus_untranscribed_p_value transcribed_versus_untranscribed_q_value percentage_of_mutations_on_strands signature_number_of_mutations_on_strands significant_strand FC_REAL FC_SIMS FC fold_change_1.1 fold_change_1.2 fold_change_1.3 fold_change_1.5 fold_change_1.75 fold_change_2+ Transcribed_real_count.1 Transcribed_mean_sims_count.1 Transcribed_min_sims_count Transcribed_max_sims_count Transcribed_sims_count_list UnTranscribed_real_count.1 UnTranscribed_mean_sims_count.1 UnTranscribed_min_sims_count UnTranscribed_max_sims_count UnTranscribed_sims_count_list NonTranscribed_real_count.1 NonTranscribed_mean_sims_count.1 NonTranscribed_min_sims_count NonTranscribed_max_sims_count NonTranscribed_sims_count_list Skin-Melanoma SBS7c C>A 2489.0 3333.0 12338.0 4002.82 4094.91 10122.28 6.824957927633781e-15 5.0443982694695456e-14 2.187 830185.0 Untranscribed 1.339 1.023 1.309 1 1 1 2489.0 4002.82 3886.0 4124.0 [4016, 3917, 4019, 3985, 4095, 4068, 3952, 4109, 4006, 3916, 4113, 4006, 4036, 4038, 3917, 4007, 4058, 4020, 3998, 4006, 4015, 3988, 4025, 3941, 3924, 3985, 4028, 4075, 3956, 4060, 3922, 4024, 3946, 4089, 3908, 3994, 3990, 3961, 4011, 3979, 3950, 3886, 4124, 3990, 3983, 3973, 3999, 4026, 4104, 4083, 3971, 3967, 4031, 3938, 3985, 3902, 4019, 3935, 4076, 4007, 3901, 4035, 4043, 4066, 3898, 4023, 3996, 4040, 3940, 4102, 3968, 3965, 4071, 4084, 4056, 3909, 4019, 4000, 3950, 3970, 3969, 4002, 3994, 3919, 3993, 4057, 3975, 4069, 4107, 3963, 4013, 3953, 3975, 4059, 4079, 4017, 4023, 4001, 4028, 3998] 3333.0 4094.91 3952.0 4236.0 [4010, 4144, 4081, 4036, 4096, 4075, 4129, 4019, 4114, 4169, 4116, 4176, 4067, 4156, 4205, 4070, 4184, 4141, 4018, 4151, 4154, 4078, 4077, 4102, 4095, 4115, 4030, 4119, 4140, 4038, 4218, 4235, 4073, 4165, 4085, 3952, 4084, 4078, 4093, 4032, 4101, 4097, 4085, 4119, 4134, 4129, 4077, 4066, 4097, 4133, 4078, 4164, 4093, 4152, 4048, 4120, 4123, 4041, 4110, 4146, 4153, 4078, 3972, 3992, 4080, 4147, 4122, 4098, 4236, 4012, 4096, 4069, 4141, 4065, 3983, 4136, 4018, 4152, 4105, 4056, 4153, 4130, 4004, 4098, 4028, 4057, 4047, 4016, 3991, 4169, 4040, 4094, 4181, 4060, 4151, 4063, 4090, 4010, 4116, 4049] 12338.0 10122.28 9970.0 10273.0 [10191, 10167, 10115, 10211, 10030, 10079, 10152, 10083, 10093, 10134, 9992, 10037, 10131, 10030, 10111, 10139, 9994, 10066, 10202, 10072, 10028, 10148, 10129, 10176, 10190, 10124, 10157, 10023, 10125, 10109, 10074, 9972, 10200, 9970, 10214, 10273, 10141, 10187, 10123, 10218, 10173, 10224, 10004, 10105, 10103, 10131, 10156, 10107, 10004, 9999, 10160, 10095, 10078, 10126, 10191, 10205, 10087, 10247, 10038, 10085, 10166, 10117, 10192, 10170, 10247, 10054, 10091, 10079, 10043, 10111, 10159, 10180, 10025, 10072, 10188, 10158, 10174, 10063, 10161, 10192, 10107, 10089, 10207, 10208, 10204, 10109, 10198, 10137, 10129, 10095, 10178, 10178, 10057, 10107, 9991, 10148, 10118, 10185, 10061, 10152] Skin-Melanoma SBS7c C>G 1998.0 2758.0 10062.0 3023.79 3253.88 8567.92 1.2800617640248155e-10 8.126953929912607e-10 1.785 830185.0 Untranscribed 1.38 1.076 1.283 1 1 1998.0 3023.79 2865.0 3156.0 [2973, 3001, 3014, 2988, 2993, 3044, 2985, 3021, 3015, 3055, 3029, 3015, 2984, 2977, 3008, 3049, 2973, 3091, 2961, 2997, 3080, 3067, 3021, 3053, 3035, 3003, 3102, 2942, 2976, 3005, 2982, 3017, 2965, 3041, 2966, 3060, 3008, 2907, 3069, 3123, 2924, 3113, 3020, 3059, 2931, 3012, 3099, 3030, 3060, 3075, 3046, 3029, 3032, 2968, 3022, 2880, 3068, 3028, 3067, 3051, 3057, 3022, 2957, 2978, 2942, 3070, 3078, 3091, 3050, 3052, 3135, 2975, 3012, 3001, 3023, 3073, 2997, 3122, 3042, 3061, 2957, 2987, 3080, 2985, 2984, 3066, 3156, 3068, 3007, 3041, 2949, 2865, 3045, 3117, 3047, 3013, 3046, 3029, 3013, 3077] 2758.0 3253.88 3118.0 3384.0 [3311, 3277, 3304, 3230, 3236, 3309, 3248, 3293, 3297, 3238, 3304, 3302, 3279, 3328, 3295, 3313, 3200, 3196, 3176, 3137, 3208, 3248, 3252, 3157, 3298, 3192, 3239, 3359, 3265, 3278, 3232, 3258, 3350, 3291, 3266, 3242, 3333, 3308, 3218, 3319, 3248, 3178, 3248, 3240, 3354, 3159, 3189, 3264, 3222, 3231, 3183, 3271, 3280, 3217, 3283, 3299, 3277, 3304, 3211, 3182, 3295, 3209, 3242, 3263, 3268, 3290, 3198, 3271, 3255, 3177, 3273, 3240, 3211, 3304, 3265, 3254, 3258, 3232, 3249, 3224, 3274, 3299, 3271, 3223, 3333, 3240, 3261, 3257, 3221, 3222, 3287, 3384, 3223, 3231, 3219, 3265, 3237, 3239, 3180, 3118] 10062.0 8567.92 8408.0 8716.0 [8569, 8557, 8523, 8627, 8618, 8495, 8623, 8528, 8525, 8552, 8521, 8519, 8581, 8529, 8526, 8478, 8668, 8564, 8713, 8716, 8572, 8534, 8578, 8641, 8511, 8643, 8509, 8535, 8606, 8568, 8623, 8561, 8513, 8512, 8612, 8536, 8511, 8640, 8558, 8408, 8678, 8560, 8579, 8558, 8555, 8662, 8569, 8559, 8576, 8530, 8599, 8545, 8541, 8671, 8541, 8664, 8495, 8520, 8567, 8624, 8495, 8610, 8643, 8608, 8655, 8476, 8564, 8489, 8532, 8619, 8445, 8631, 8618, 8544, 8546, 8520, 8601, 8490, 8556, 8568, 8606, 8570, 8504, 8632, 8533, 8534, 8447, 8515, 8629, 8577, 8608, 8595, 8569, 8505, 8576, 8553, 8569, 8578, 8645, 8641] Skin-Melanoma SBS7c C>T 0.0 0.0 0.0 0.0 0.0 0.0 1.0 1.0 0.0 830185.0 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] Skin-Melanoma SBS7c T>A 63636.0 94584.0 371621.0 100517.09 122485.5 308205.67 7.324441090578729e-196 1.9160534436256995e-194 63.822 830185.0 Untranscribed 1.486 1.219 1.22 1 1 63636.0 100517.09 99924.0 101297.0 [100721, 99924, 100323, 100723, 100486, 100377, 100400, 100212, 100935, 100116, 100512, 100267, 100290, 100388, 100229, 100515, 100742, 100610, 100561, 100248, 100069, 100562, 100340, 100173, 100601, 100473, 101087, 100583, 100957, 100256, 100438, 100704, 100487, 100356, 100360, 100902, 100178, 100929, 100887, 100339, 100243, 100287, 100679, 100737, 100723, 100190, 100644, 100835, 100514, 100249, 100430, 100126, 100857, 100414, 100601, 100563, 100800, 100022, 100520, 100342, 100556, 101016, 100142, 100639, 100940, 100220, 101297, 100606, 100420, 100635, 100631, 100716, 100126, 100468, 100803, 101025, 100230, 101158, 100555, 100346, 100159, 100300, 100602, 100431, 100317, 100556, 100443, 100642, 100642, 100752, 100144, 100842, 100624, 100533, 100871, 100600, 100896, 99973, 100501, 100316] 94584.0 122485.5 121660.0 123321.0 [122725, 122169, 123083, 122526, 122478, 122532, 122408, 122435, 122394, 122179, 122370, 122552, 122495, 122530, 122361, 122474, 122371, 122576, 122803, 122446, 122373, 122339, 122777, 122188, 122712, 122376, 122672, 122243, 122288, 122380, 122470, 122530, 122086, 122022, 122797, 122652, 122544, 122499, 122367, 122398, 122253, 123128, 122477, 122081, 123150, 122971, 122873, 122228, 122304, 122847, 122142, 122254, 122712, 122509, 121660, 122478, 122219, 122555, 122611, 122856, 122267, 122302, 122879, 122060, 122216, 122279, 122341, 122671, 122174, 122818, 122253, 122568, 122206, 122286, 122388, 123321, 122265, 122316, 122576, 122472, 122675, 122581, 122297, 122271, 122600, 123020, 122524, 122811, 122755, 122659, 122526, 121980, 122502, 122434, 122413, 122197, 122685, 123008, 122304, 122722] 371621.0 308205.67 306860.0 309100.0 [307798, 309100, 307860, 307945, 308246, 308316, 308399, 308577, 307869, 308932, 308394, 308361, 308449, 308267, 308608, 308153, 308120, 308033, 307908, 308528, 308746, 308313, 308039, 308852, 307941, 308421, 307436, 308336, 307974, 308602, 308300, 307945, 308654, 308835, 308025, 307724, 308538, 307769, 307958, 308402, 308732, 307812, 308021, 308383, 307357, 308144, 307713, 308121, 308448, 308104, 308595, 308772, 307644, 308199, 309011, 308122, 308274, 308647, 308074, 308013, 308322, 307907, 308158, 308497, 308021, 308687, 307653, 307902, 308519, 307736, 308384, 307983, 308886, 308406, 308039, 306860, 308732, 307707, 308102, 308404, 308372, 308355, 308298, 308434, 308276, 307621, 308184, 307663, 307771, 307806, 308522, 308396, 308083, 308320, 307898, 308398, 307651, 308240, 308312, 308203] Skin-Melanoma SBS7c T>C 14759.0 21529.0 78981.0 21589.89 26826.47 67084.61 3.8590939080114396e-30 3.8424335025935925e-29 13.885 830185.0 Untranscribed 1.459 1.243 1.174 1 14759.0 21589.89 21243.0 21921.0 [21384, 21635, 21904, 21277, 21718, 21529, 21511, 21726, 21793, 21449, 21567, 21747, 21243, 21921, 21492, 21636, 21445, 21696, 21504, 21751, 21714, 21812, 21867, 21345, 21606, 21607, 21555, 21578, 21705, 21572, 21642, 21705, 21575, 21686, 21660, 21615, 21609, 21467, 21464, 21752, 21538, 21758, 21544, 21363, 21732, 21484, 21444, 21763, 21408, 21733, 21693, 21479, 21444, 21619, 21481, 21475, 21552, 21477, 21844, 21587, 21501, 21608, 21565, 21746, 21503, 21567, 21604, 21626, 21511, 21512, 21668, 21590, 21478, 21854, 21751, 21427, 21698, 21522, 21549, 21661, 21549, 21469, 21617, 21554, 21569, 21527, 21503, 21561, 21617, 21408, 21575, 21658, 21562, 21564, 21551, 21651, 21254, 21462, 21671, 21844] 21529.0 26826.47 26377.0 27200.0 [26953, 26785, 26851, 26935, 26860, 26674, 26805, 26871, 26727, 26833, 27028, 26887, 27200, 26654, 26744, 26797, 26878, 26765, 26809, 26825, 26679, 26895, 26662, 26825, 26711, 26923, 26377, 26822, 26804, 26712, 26903, 26864, 26963, 26662, 26694, 26819, 27077, 27097, 26822, 26676, 27086, 26704, 26823, 26574, 26841, 26955, 26803, 26864, 26730, 26682, 26746, 26674, 26707, 26839, 26726, 26783, 26950, 26883, 26882, 26745, 26754, 26978, 26957, 26585, 26550, 26703, 26583, 26777, 26785, 27050, 26992, 26909, 26851, 27002, 26806, 26735, 26804, 26911, 26901, 26850, 26797, 27042, 26727, 26809, 26987, 26737, 26853, 26663, 26930, 27044, 26806, 27023, 26985, 26752, 27051, 26908, 26873, 26760, 26866, 26686] 78981.0 67084.61 66665.0 67549.0 [67140, 67074, 66740, 67307, 66916, 67290, 67186, 66894, 66976, 67196, 66896, 66897, 67103, 66946, 67238, 67068, 67160, 67057, 67171, 66919, 67060, 66791, 67015, 67336, 67136, 66975, 67549, 67099, 67000, 67190, 66940, 66935, 66965, 67155, 67144, 67053, 66784, 66925, 67208, 67079, 66895, 67046, 67136, 67510, 66912, 67052, 67268, 66861, 67330, 67068, 67069, 67342, 67359, 67060, 67285, 67260, 67029, 67147, 66781, 67164, 67276, 66918, 66967, 67153, 67411, 67224, 67323, 67136, 67215, 66936, 66837, 66980, 67194, 66665, 66948, 67329, 66989, 67095, 67077, 67006, 67164, 67028, 67164, 67134, 66958, 67262, 67143, 67274, 67003, 67014, 67129, 66856, 66959, 67157, 66916, 66950, 67387, 67268, 66988, 66941] Skin-Melanoma SBS7c T>G 19723.0 27935.0 104439.0 29629.98 34206.51 88598.7 6.915495668705906e-63 9.720400068662368e-62 18.321 830185.0 Untranscribed 1.416 1.154 1.227 1 1 19723.0 29629.98 29281.0 30097.0 [29749, 29468, 29789, 29817, 29367, 29713, 29604, 29712, 29816, 29537, 29575, 29615, 29560, 29634, 29736, 29508, 29584, 29454, 29609, 29576, 29754, 29717, 29575, 29710, 29465, 29879, 29844, 29542, 29285, 29627, 29771, 29639, 29617, 29458, 29737, 29830, 29726, 30097, 29550, 29541, 29700, 29281, 29697, 29735, 29911, 29645, 29418, 29398, 29593, 29445, 29630, 29535, 29697, 29762, 29657, 29502, 29720, 29759, 29696, 29728, 29649, 29891, 29418, 29314, 29440, 29523, 29500, 29440, 29764, 29622, 29550, 29727, 29710, 29589, 29648, 29563, 29805, 29516, 29443, 29755, 29679, 29724, 29876, 29568, 29691, 29579, 29664, 29667, 29632, 29815, 29496, 29761, 29517, 29548, 29521, 29590, 29433, 29607, 29929, 29538] 27935.0 34206.51 33858.0 34596.0 [34287, 34180, 34277, 34107, 34224, 34106, 34291, 34259, 34299, 34596, 34159, 34372, 34446, 34054, 34421, 34108, 34345, 34067, 34062, 34260, 34207, 34027, 34226, 33881, 34115, 34023, 33925, 33979, 34119, 34266, 33858, 34204, 34278, 34089, 34199, 34243, 34385, 34108, 34194, 34280, 34191, 34303, 34144, 34294, 34429, 34530, 34199, 34270, 34032, 34354, 33937, 34179, 34130, 34091, 34147, 34385, 34253, 34256, 34058, 34096, 33996, 34353, 34203, 34343, 34125, 34375, 34201, 34220, 33959, 34367, 34206, 34134, 34271, 34142, 34171, 34542, 34351, 34116, 34144, 34141, 34102, 34028, 34248, 34055, 33943, 34230, 34404, 34313, 34262, 34205, 34414, 34254, 34413, 34463, 33975, 34410, 34135, 34142, 34233, 34258] 104439.0 88598.7 88120.0 89059.0 [88434, 88816, 88327, 88474, 88827, 88621, 88594, 88506, 88299, 88331, 88689, 88426, 88417, 88716, 88246, 88852, 88485, 88926, 88786, 88619, 88466, 88663, 88660, 88818, 88860, 88507, 88675, 88888, 89059, 88500, 88773, 88643, 88535, 88867, 88499, 88377, 88356, 88220, 88731, 88617, 88565, 88859, 88559, 88424, 88120, 88242, 88796, 88708, 88809, 88639, 88816, 88724, 88616, 88587, 88593, 88593, 88462, 88402, 88674, 88622, 88773, 88235, 88786, 88838, 88861, 88563, 88713, 88768, 88703, 88460, 88663, 88608, 88485, 88694, 88607, 88291, 88266, 88812, 88871, 88552, 88684, 88653, 88331, 88813, 88783, 88601, 88389, 88412, 88507, 88430, 88538, 88424, 88475, 88431, 88933, 88489, 88899, 88666, 88293, 88655] Summary across all cancer types signature mutation_type strand fold_change_1.1 len(fold_change_1.1_cancer_types) fold_change_1.2 len(fold_change_1.2_cancer_types) fold_change_1.3 len(fold_change_1.3_cancer_types) fold_change_1.5 len(fold_change_1.5_cancer_types) fold_change_1.75 len(fold_change_1.75_cancer_types) fold_change_2+ len(fold_change_2+_cancer_types) all_cancer_types_list len(all_cancer_types_list) avg_fold_change SBS7c T>A Untranscribed ['Skin-Melanoma'] 1 ['Skin-Melanoma'] 1 [] 0 [] 0 [] 0 [] 0 ['Skin-Melanoma'] 1 1.2 SBS7c T>C Untranscribed ['Skin-Melanoma'] 1 [] 0 [] 0 [] 0 [] 0 [] 0 ['Skin-Melanoma'] 1 1.1 SBS7c T>G Untranscribed ['Skin-Melanoma'] 1 ['Skin-Melanoma'] 1 [] 0 [] 0 [] 0 [] 0 ['Skin-Melanoma'] 1 1.2