# Only cancer types with minimum 2000 mutations for SBS signatures and minimum 1000 mutations for DBS and ID signatures with average probability at least 0.75 are considered. # For real mutations on transcribed:T, untranscribed:U, bitranscribed:B and nontranscribed:N strands averaged across cancer types. MutationType Across_All_Cancer_Types T:A[C>A]A 144.0 U:A[C>A]A 108.0 B:A[C>A]A 0.0 N:A[C>A]A 565.0 T:A[C>A]C 103.0 U:A[C>A]C 83.0 B:A[C>A]C 0.0 N:A[C>A]C 400.0 T:A[C>A]G 41.0 U:A[C>A]G 32.0 B:A[C>A]G 0.0 N:A[C>A]G 104.0 T:A[C>A]T 121.0 U:A[C>A]T 100.0 B:A[C>A]T 1.0 N:A[C>A]T 474.0 T:A[C>G]A 554.0 U:A[C>G]A 408.0 B:A[C>G]A 3.0 N:A[C>G]A 1492.0 T:A[C>G]C 254.0 U:A[C>G]C 237.0 B:A[C>G]C 2.0 N:A[C>G]C 740.0 T:A[C>G]G 169.0 U:A[C>G]G 160.0 B:A[C>G]G 0.0 N:A[C>G]G 463.0 T:A[C>G]T 476.0 U:A[C>G]T 465.0 B:A[C>G]T 9.0 N:A[C>G]T 1390.0 T:A[C>T]A 93.0 U:A[C>T]A 77.0 B:A[C>T]A 0.0 N:A[C>T]A 342.0 T:A[C>T]C 30.0 U:A[C>T]C 24.0 B:A[C>T]C 0.0 N:A[C>T]C 132.0 T:A[C>T]G 76.0 U:A[C>T]G 64.0 B:A[C>T]G 0.0 N:A[C>T]G 254.0 T:A[C>T]T 132.0 U:A[C>T]T 113.0 B:A[C>T]T 0.0 N:A[C>T]T 529.0 T:A[T>A]A 58.0 U:A[T>A]A 50.0 B:A[T>A]A 0.0 N:A[T>A]A 242.0 T:A[T>A]C 27.0 U:A[T>A]C 20.0 B:A[T>A]C 0.0 N:A[T>A]C 128.0 T:A[T>A]G 69.0 U:A[T>A]G 57.0 B:A[T>A]G 0.0 N:A[T>A]G 305.0 T:A[T>A]T 60.0 U:A[T>A]T 67.0 B:A[T>A]T 0.0 N:A[T>A]T 317.0 T:A[T>C]A 94.0 U:A[T>C]A 72.0 B:A[T>C]A 0.0 N:A[T>C]A 335.0 T:A[T>C]C 67.0 U:A[T>C]C 51.0 B:A[T>C]C 0.0 N:A[T>C]C 248.0 T:A[T>C]G 70.0 U:A[T>C]G 49.0 B:A[T>C]G 0.0 N:A[T>C]G 240.0 T:A[T>C]T 111.0 U:A[T>C]T 112.0 B:A[T>C]T 0.0 N:A[T>C]T 446.0 T:A[T>G]A 77.0 U:A[T>G]A 68.0 B:A[T>G]A 0.0 N:A[T>G]A 286.0 T:A[T>G]C 31.0 U:A[T>G]C 25.0 B:A[T>G]C 0.0 N:A[T>G]C 131.0 T:A[T>G]G 95.0 U:A[T>G]G 80.0 B:A[T>G]G 0.0 N:A[T>G]G 363.0 T:A[T>G]T 97.0 U:A[T>G]T 109.0 B:A[T>G]T 0.0 N:A[T>G]T 374.0 T:C[C>A]A 145.0 U:C[C>A]A 120.0 B:C[C>A]A 1.0 N:C[C>A]A 572.0 T:C[C>A]C 167.0 U:C[C>A]C 131.0 B:C[C>A]C 0.0 N:C[C>A]C 514.0 T:C[C>A]G 46.0 U:C[C>A]G 45.0 B:C[C>A]G 0.0 N:C[C>A]G 127.0 T:C[C>A]T 112.0 U:C[C>A]T 89.0 B:C[C>A]T 0.0 N:C[C>A]T 483.0 T:C[C>G]A 310.0 U:C[C>G]A 279.0 B:C[C>G]A 2.0 N:C[C>G]A 876.0 T:C[C>G]C 265.0 U:C[C>G]C 245.0 B:C[C>G]C 1.0 N:C[C>G]C 752.0 T:C[C>G]G 101.0 U:C[C>G]G 185.0 B:C[C>G]G 4.0 N:C[C>G]G 338.0 T:C[C>G]T 417.0 U:C[C>G]T 443.0 B:C[C>G]T 4.0 N:C[C>G]T 1179.0 T:C[C>T]A 101.0 U:C[C>T]A 78.0 B:C[C>T]A 0.0 N:C[C>T]A 306.0 T:C[C>T]C 34.0 U:C[C>T]C 25.0 B:C[C>T]C 0.0 N:C[C>T]C 116.0 T:C[C>T]G 54.0 U:C[C>T]G 57.0 B:C[C>T]G 0.0 N:C[C>T]G 182.0 T:C[C>T]T 88.0 U:C[C>T]T 77.0 B:C[C>T]T 0.0 N:C[C>T]T 314.0 T:C[T>A]A 82.0 U:C[T>A]A 70.0 B:C[T>A]A 0.0 N:C[T>A]A 367.0 T:C[T>A]C 91.0 U:C[T>A]C 78.0 B:C[T>A]C 0.0 N:C[T>A]C 384.0 T:C[T>A]G 116.0 U:C[T>A]G 92.0 B:C[T>A]G 1.0 N:C[T>A]G 407.0 T:C[T>A]T 143.0 U:C[T>A]T 158.0 B:C[T>A]T 0.0 N:C[T>A]T 739.0 T:C[T>C]A 65.0 U:C[T>C]A 62.0 B:C[T>C]A 0.0 N:C[T>C]A 279.0 T:C[T>C]C 113.0 U:C[T>C]C 97.0 B:C[T>C]C 0.0 N:C[T>C]C 429.0 T:C[T>C]G 55.0 U:C[T>C]G 63.0 B:C[T>C]G 0.0 N:C[T>C]G 220.0 T:C[T>C]T 100.0 U:C[T>C]T 112.0 B:C[T>C]T 0.0 N:C[T>C]T 406.0 T:C[T>G]A 75.0 U:C[T>G]A 70.0 B:C[T>G]A 0.0 N:C[T>G]A 268.0 T:C[T>G]C 73.0 U:C[T>G]C 76.0 B:C[T>G]C 0.0 N:C[T>G]C 268.0 T:C[T>G]G 128.0 U:C[T>G]G 115.0 B:C[T>G]G 0.0 N:C[T>G]G 441.0 T:C[T>G]T 71.0 U:C[T>G]T 91.0 B:C[T>G]T 0.0 N:C[T>G]T 322.0 T:G[C>A]A 65.0 U:G[C>A]A 55.0 B:G[C>A]A 0.0 N:G[C>A]A 252.0 T:G[C>A]C 75.0 U:G[C>A]C 61.0 B:G[C>A]C 0.0 N:G[C>A]C 268.0 T:G[C>A]G 30.0 U:G[C>A]G 24.0 B:G[C>A]G 0.0 N:G[C>A]G 71.0 T:G[C>A]T 67.0 U:G[C>A]T 55.0 B:G[C>A]T 0.0 N:G[C>A]T 283.0 T:G[C>G]A 218.0 U:G[C>G]A 170.0 B:G[C>G]A 2.0 N:G[C>G]A 609.0 T:G[C>G]C 190.0 U:G[C>G]C 178.0 B:G[C>G]C 0.0 N:G[C>G]C 538.0 T:G[C>G]G 59.0 U:G[C>G]G 70.0 B:G[C>G]G 0.0 N:G[C>G]G 172.0 T:G[C>G]T 328.0 U:G[C>G]T 334.0 B:G[C>G]T 3.0 N:G[C>G]T 932.0 T:G[C>T]A 89.0 U:G[C>T]A 77.0 B:G[C>T]A 0.0 N:G[C>T]A 280.0 T:G[C>T]C 33.0 U:G[C>T]C 30.0 B:G[C>T]C 0.0 N:G[C>T]C 119.0 T:G[C>T]G 43.0 U:G[C>T]G 46.0 B:G[C>T]G 0.0 N:G[C>T]G 176.0 T:G[C>T]T 78.0 U:G[C>T]T 81.0 B:G[C>T]T 1.0 N:G[C>T]T 293.0 T:G[T>A]A 49.0 U:G[T>A]A 50.0 B:G[T>A]A 0.0 N:G[T>A]A 226.0 T:G[T>A]C 35.0 U:G[T>A]C 40.0 B:G[T>A]C 0.0 N:G[T>A]C 156.0 T:G[T>A]G 69.0 U:G[T>A]G 69.0 B:G[T>A]G 0.0 N:G[T>A]G 276.0 T:G[T>A]T 56.0 U:G[T>A]T 69.0 B:G[T>A]T 0.0 N:G[T>A]T 312.0 T:G[T>C]A 78.0 U:G[T>C]A 74.0 B:G[T>C]A 0.0 N:G[T>C]A 274.0 T:G[T>C]C 79.0 U:G[T>C]C 56.0 B:G[T>C]C 0.0 N:G[T>C]C 284.0 T:G[T>C]G 38.0 U:G[T>C]G 45.0 B:G[T>C]G 0.0 N:G[T>C]G 175.0 T:G[T>C]T 76.0 U:G[T>C]T 87.0 B:G[T>C]T 0.0 N:G[T>C]T 327.0 T:G[T>G]A 43.0 U:G[T>G]A 43.0 B:G[T>G]A 0.0 N:G[T>G]A 170.0 T:G[T>G]C 51.0 U:G[T>G]C 56.0 B:G[T>G]C 2.0 N:G[T>G]C 173.0 T:G[T>G]G 59.0 U:G[T>G]G 62.0 B:G[T>G]G 0.0 N:G[T>G]G 275.0 T:G[T>G]T 89.0 U:G[T>G]T 124.0 B:G[T>G]T 0.0 N:G[T>G]T 400.0 T:T[C>A]A 57.0 U:T[C>A]A 54.0 B:T[C>A]A 0.0 N:T[C>A]A 235.0 T:T[C>A]C 102.0 U:T[C>A]C 86.0 B:T[C>A]C 0.0 N:T[C>A]C 343.0 T:T[C>A]G 11.0 U:T[C>A]G 8.0 B:T[C>A]G 0.0 N:T[C>A]G 56.0 T:T[C>A]T 71.0 U:T[C>A]T 77.0 B:T[C>A]T 0.0 N:T[C>A]T 316.0 T:T[C>G]A 435.0 U:T[C>G]A 382.0 B:T[C>G]A 0.0 N:T[C>G]A 1160.0 T:T[C>G]C 413.0 U:T[C>G]C 405.0 B:T[C>G]C 2.0 N:T[C>G]C 1211.0 T:T[C>G]G 75.0 U:T[C>G]G 99.0 B:T[C>G]G 0.0 N:T[C>G]G 243.0 T:T[C>G]T 670.0 U:T[C>G]T 730.0 B:T[C>G]T 11.0 N:T[C>G]T 2007.0 T:T[C>T]A 38.0 U:T[C>T]A 36.0 B:T[C>T]A 0.0 N:T[C>T]A 138.0 T:T[C>T]C 56.0 U:T[C>T]C 49.0 B:T[C>T]C 0.0 N:T[C>T]C 188.0 T:T[C>T]G 34.0 U:T[C>T]G 40.0 B:T[C>T]G 0.0 N:T[C>T]G 103.0 T:T[C>T]T 40.0 U:T[C>T]T 46.0 B:T[C>T]T 0.0 N:T[C>T]T 175.0 T:T[T>A]A 63.0 U:T[T>A]A 77.0 B:T[T>A]A 0.0 N:T[T>A]A 269.0 T:T[T>A]C 37.0 U:T[T>A]C 36.0 B:T[T>A]C 0.0 N:T[T>A]C 187.0 T:T[T>A]G 47.0 U:T[T>A]G 56.0 B:T[T>A]G 0.0 N:T[T>A]G 228.0 T:T[T>A]T 111.0 U:T[T>A]T 132.0 B:T[T>A]T 0.0 N:T[T>A]T 575.0 T:T[T>C]A 53.0 U:T[T>C]A 41.0 B:T[T>C]A 0.0 N:T[T>C]A 184.0 T:T[T>C]C 73.0 U:T[T>C]C 76.0 B:T[T>C]C 0.0 N:T[T>C]C 308.0 T:T[T>C]G 29.0 U:T[T>C]G 36.0 B:T[T>C]G 0.0 N:T[T>C]G 133.0 T:T[T>C]T 79.0 U:T[T>C]T 95.0 B:T[T>C]T 0.0 N:T[T>C]T 336.0 T:T[T>G]A 87.0 U:T[T>G]A 92.0 B:T[T>G]A 0.0 N:T[T>G]A 336.0 T:T[T>G]C 41.0 U:T[T>G]C 41.0 B:T[T>G]C 0.0 N:T[T>G]C 176.0 T:T[T>G]G 85.0 U:T[T>G]G 107.0 B:T[T>G]G 0.0 N:T[T>G]G 381.0 T:T[T>G]T 108.0 U:T[T>G]T 143.0 B:T[T>G]T 0.0 N:T[T>G]T 448.0 # There must be at least 1000 mutations on the strands. # Signature and mutation type must have at least 5% of all signature mutations on the strands. # Odds ratio between fold change of real mutations and fold change of simulated mutations must be at least 1.1. cancer_type signature mutation_type Transcribed_real_count UnTranscribed_real_count NonTranscribed_real_count Transcribed_mean_sims_count UnTranscribed_mean_sims_count NonTranscribed_mean_sims_count transcribed_versus_untranscribed_p_value transcribed_versus_untranscribed_q_value percentage_of_mutations_on_strands signature_number_of_mutations_on_strands significant_strand FC_REAL FC_SIMS FC fold_change_1.1 fold_change_1.2 fold_change_1.3 fold_change_1.5 fold_change_1.75 fold_change_2+ Transcribed_real_count.1 Transcribed_mean_sims_count.1 Transcribed_min_sims_count Transcribed_max_sims_count Transcribed_sims_count_list UnTranscribed_real_count.1 UnTranscribed_mean_sims_count.1 UnTranscribed_min_sims_count UnTranscribed_max_sims_count UnTranscribed_sims_count_list NonTranscribed_real_count.1 NonTranscribed_mean_sims_count.1 NonTranscribed_min_sims_count NonTranscribed_max_sims_count NonTranscribed_sims_count_list Breast-Cancer SBS39 C>A 0.0 0.0 0.0 0.0 0.0 0.0 1.0 1.0 0.0 12316.0 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] Breast-Cancer SBS39 C>G 2612.0 2527.0 6985.0 2812.36 2655.56 6664.74 0.534047851571757 0.965180676573233 98.441 12316.0 Transcribed 1.034 1.059 0.976 2612.0 2812.36 2695.0 2923.0 [2778, 2821, 2725, 2743, 2800, 2791, 2838, 2825, 2801, 2844, 2743, 2829, 2834, 2846, 2751, 2813, 2848, 2823, 2782, 2860, 2923, 2801, 2752, 2857, 2788, 2834, 2858, 2867, 2812, 2861, 2847, 2787, 2840, 2780, 2822, 2818, 2786, 2710, 2804, 2774, 2825, 2796, 2779, 2799, 2798, 2848, 2860, 2758, 2815, 2814, 2695, 2750, 2720, 2802, 2759, 2830, 2816, 2833, 2908, 2800, 2875, 2779, 2881, 2862, 2838, 2797, 2747, 2776, 2846, 2816, 2875, 2782, 2871, 2819, 2848, 2774, 2777, 2850, 2825, 2804, 2817, 2793, 2864, 2785, 2749, 2806, 2811, 2793, 2886, 2822, 2877, 2805, 2758, 2868, 2776, 2857, 2798, 2774, 2875, 2859] 2527.0 2655.56 2521.0 2767.0 [2714, 2653, 2665, 2654, 2631, 2647, 2702, 2614, 2666, 2689, 2718, 2611, 2706, 2646, 2661, 2629, 2650, 2605, 2652, 2561, 2600, 2677, 2612, 2662, 2644, 2630, 2634, 2655, 2609, 2656, 2603, 2767, 2632, 2705, 2728, 2708, 2685, 2757, 2695, 2683, 2701, 2661, 2664, 2659, 2644, 2704, 2706, 2617, 2672, 2628, 2734, 2679, 2644, 2651, 2746, 2607, 2694, 2585, 2598, 2630, 2591, 2682, 2627, 2668, 2663, 2699, 2675, 2669, 2675, 2690, 2604, 2741, 2662, 2658, 2603, 2646, 2581, 2683, 2610, 2628, 2690, 2677, 2592, 2668, 2701, 2718, 2632, 2680, 2582, 2661, 2593, 2623, 2623, 2587, 2644, 2635, 2677, 2703, 2654, 2521] 6985.0 6664.74 6565.0 6771.0 [6646, 6655, 6739, 6741, 6707, 6690, 6594, 6684, 6669, 6593, 6669, 6677, 6586, 6646, 6731, 6676, 6637, 6713, 6687, 6709, 6604, 6650, 6769, 6615, 6697, 6673, 6647, 6618, 6725, 6611, 6683, 6593, 6663, 6644, 6587, 6619, 6642, 6664, 6625, 6689, 6606, 6674, 6696, 6684, 6694, 6589, 6565, 6757, 6649, 6689, 6720, 6704, 6754, 6667, 6628, 6690, 6625, 6718, 6626, 6700, 6665, 6669, 6625, 6595, 6642, 6645, 6698, 6676, 6616, 6628, 6656, 6616, 6593, 6660, 6680, 6718, 6771, 6603, 6687, 6702, 6608, 6663, 6678, 6682, 6680, 6598, 6700, 6669, 6664, 6653, 6664, 6705, 6750, 6689, 6711, 6646, 6660, 6656, 6608, 6743] Breast-Cancer SBS39 C>T 0.0 0.0 0.0 0.0 0.0 0.0 1.0 1.0 0.0 12316.0 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] Breast-Cancer SBS39 T>A 0.0 0.0 0.0 0.0 0.0 0.0 1.0 1.0 0.0 12316.0 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] Breast-Cancer SBS39 T>C 0.0 0.0 0.0 0.0 0.0 0.0 1.0 1.0 0.0 12316.0 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] 0.0 0.0 0.0 0.0 [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] Breast-Cancer SBS39 T>G 41.0 39.0 112.0 37.64 44.81 110.43 0.5296632861837076 0.961099036153192 1.559 12316.0 Transcribed 1.051 0.84 1.252 1 1 41.0 37.64 26.0 54.0 [34, 29, 38, 41, 31, 44, 37, 37, 40, 31, 37, 34, 46, 32, 37, 39, 42, 45, 48, 33, 30, 37, 33, 39, 42, 34, 33, 26, 37, 31, 42, 38, 37, 54, 44, 26, 28, 39, 28, 40, 43, 44, 43, 26, 35, 36, 45, 46, 41, 39, 37, 33, 35, 33, 42, 40, 48, 35, 45, 43, 32, 33, 34, 27, 45, 39, 33, 41, 36, 36, 40, 45, 33, 43, 36, 30, 40, 43, 33, 42, 34, 44, 40, 47, 39, 41, 46, 35, 27, 36, 32, 44, 38, 42, 31, 33, 35, 29, 43, 45] 39.0 44.81 31.0 59.0 [58, 58, 49, 52, 46, 45, 47, 43, 44, 59, 50, 45, 34, 45, 43, 49, 49, 44, 48, 43, 44, 40, 47, 54, 48, 56, 41, 49, 44, 55, 51, 56, 48, 33, 43, 49, 45, 37, 46, 51, 40, 42, 43, 43, 41, 51, 42, 45, 36, 33, 43, 45, 33, 40, 38, 45, 40, 37, 36, 50, 45, 47, 50, 50, 44, 43, 48, 48, 47, 51, 33, 31, 50, 44, 53, 50, 35, 45, 42, 39, 41, 34, 49, 43, 45, 49, 48, 47, 43, 46, 47, 46, 51, 37, 42, 37, 42, 45, 38, 45] 112.0 110.43 96.0 127.0 [104, 106, 106, 99, 115, 104, 108, 112, 109, 103, 106, 113, 112, 116, 112, 104, 104, 104, 96, 116, 121, 115, 113, 99, 104, 103, 119, 118, 111, 108, 100, 99, 108, 106, 105, 117, 120, 117, 119, 101, 109, 107, 107, 123, 116, 106, 106, 102, 115, 120, 112, 115, 127, 119, 112, 108, 108, 121, 111, 100, 115, 113, 109, 117, 104, 111, 111, 103, 110, 105, 119, 116, 110, 107, 103, 113, 118, 109, 118, 111, 118, 115, 104, 102, 109, 105, 98, 111, 122, 111, 114, 102, 107, 114, 119, 123, 116, 119, 114, 102] Summary across all cancer types signature mutation_type strand fold_change_1.1 len(fold_change_1.1_cancer_types) fold_change_1.2 len(fold_change_1.2_cancer_types) fold_change_1.3 len(fold_change_1.3_cancer_types) fold_change_1.5 len(fold_change_1.5_cancer_types) fold_change_1.75 len(fold_change_1.75_cancer_types) fold_change_2+ len(fold_change_2+_cancer_types) all_cancer_types_list len(all_cancer_types_list) avg_fold_change